Report for 6533.m00132

 > 6533.m00132, length: 1572, copies: 1 

MEEMKNKLGEGMLHIQAVLDVVNPDHFKDHSVMLDRWFWKLRDAIEEAEDAIYLHKNIKNKEKPGRLEDQIEVEV

VFQFHDFTDEEAKRSSKHCAGMFVRLCELELLIPVVFAGKSVAAPVIKEIITRALNYLDGYLSAKSMEEMKNKLE

EGMLQIQAVLDVVDPDRFKEHSVALDQWFWKLRDAVEEAEDAIDELEYYELEEEAKDYKVSDWGSPLAKWKHKVV

KSIKDVRVLDKSVNQFTHRGTLKRLKKAMDGLDKAAAGTTKFLEVVRCINGATSSSQKLGHLASSNDRQTGSMLT

VDKFVGRESEKKRILEWLTKDTSVKESEIVPSANHVPIFSVIGHGGMGKTTLAQSICQQDEVVKHFKVIWITVST

SFDATSVTRKILESATKGEPSNKHLEALQQELKEKLNSVKFLLVMDDVWEEGKRDEWEKLFAPLRSGKNGSRILL

TTRMASVADMAAKAMGVARDCLILGELEEDENIELFNHHVFSSLNLQDYSHFKKTGEQIARKLGGCPLVIKVTCG

HLQGNMSVAYWENFLHIHLEHFKGSDIDIMKVLKLSYQHLPTELQICFRFCSLFPEDHKFRKEDLVHMWMCSGLI

PQATNETLNFEDIGERILADLTRKSFFDLKSRVYRYGLDQEEYYDLKSRVYRYGLDQEEYYVMHDLMHELARNVS

YGECARITSPVKFKDIRDTVRHISILCIPQFSIDVVKKISQFKNLRSIIIVTESKLDKDTKNTLQKIIESTKSLR

LFHSRLRIRFDFSSKFGKLKHLRYIDIFGISSKGIYHIAKLYHLLVLLSISSPTTVFPCRRSLLCVAKQERFMLN

LYRLRHVAYGQDTYKLFGMLPISRLESIRRLSIYHVKESGGNKVSSIKNLHCLRELNIQGVENIENHEEAINAKL

NEKQHLHSLSLEWSPHTGEHDTVDELVLQHLEPHTNIRNLRICGYEGCVVPFWIENLSVRKLVSIKLESCINWEQ

LPSLGELTLLRYLLLRNLPKLQQIGRHSHMSSSSSMELLLPPNLLSLEIEQCPELQELPLLPPSLVSFQIIEVNW

TKLPRMGKLCSKSNETILAQLQEVVINDCPCLSSLEDSFLEQKQHMVALRNLHINNCIHLESASIPFDAMIMLRY

LYIRRCPKLRALRGTGEKFLPSSLLYLQIKQCPKLQELPLLPPSLMSFKIKNVNWTKLPRMGKLCSESNETILAQ

LQEVAISSCPCLCSLDDSFLEQKQHMVALRNLHIDNCIHLESASISFEAMNMLKSLRIGGCPELRAPRGAGEMFL

PPSLKDLYIRSCGDYERIVVVSLQEQQLINLSVLNLNNCSNLVSLPPSEVFSRNFTSLQIIIIQKCGNLSSLGGL

ESLPSLSELTIRRCAKLTKFGSSVNPYVSGGEEEHLVDSRSSLRISSLTIDLPSLLLVEPLKSLCHTEHLEIEDA

SQMKSLPDRWLLQNSASLKSLHIRKVKSLESLQPSMRDLTSLQKLTLSGVGQLLGSLPDFPTSLLELDISECGSE

LKKKFRKHGSPERSKIAHILRVRIGISTLHTHILACFEACLLDVIVNLLLLLCYPFHLLPSSCPVKSMMRCP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	288	605	2.5e-51
NB-ARC [Pfam ls]	288	605	4e-51
LRR [Pfam ls]	1305	1327	0.73

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	745	770	3
LRR [sensitive, ls]	745	770	67
LRR [sensitive, ls]	1018	1041	1.1
LRR [sensitive, ls]	1018	1041	24
LRR [sensitive, ls]	1070	1094	1.5
LRR [sensitive, ls]	1070	1094	33
LRR [sensitive, ls]	1098	1124	1.1
LRR [sensitive, ls]	1098	1124	24
LRR [sensitive, ls]	1148	1171	3.4
LRR [sensitive, ls]	1148	1171	77
LRR [sensitive, ls]	1228	1251	1.7
LRR [sensitive, ls]	1228	1251	38
LRR [sensitive, ls]	1305	1327	0.033
LRR [sensitive, ls]	1305	1327	0.73
LRR [sensitive, ls]	1332	1354	0.43
LRR [sensitive, ls]	1332	1354	9.7
LRR [sensitive, ls]	1355	1376	4.3
LRR [sensitive, ls]	1355	1376	96
LRR [sensitive, ls]	1442	1465	3.6
LRR [sensitive, ls]	1442	1465	80

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	104	1496	1e-97
Mla1 [Hordeum vulgare].	110	797	1e-22
Pib [Oryza sativa].	197	990	4e-22
Xa1 [Oryza sativa]	269	1499	2e-91
RPS2 [A. thaliana]	299	1034	5e-20
Pi-ta [Oryza sativa]	303	845	3e-18
RPM1 [A. thaliana]	338	911	6e-26
Xa1 [Oryza sativa]	844	1499	1e-15
Xa1 [Oryza sativa]	874	1516	3e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	181	202

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6533.m00132

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)