Report for 6548.m00152

 > 6548.m00152, length: 369, copies: 1 

MGNCGTREENAVVAAHAQVQQLHLLQHPVKNAVAERKHTRISSDMSDPSTPRKIEDAKNISIYNDVIDFTLFELE

TITKSFRADYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKDGHQGHREWLTEVRFLGQLRHPNLVKLIGY

CCEDDHRLLVYEFMFRGSLENHLFRSEDYTAKLSDFGLAKAGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARS

DVYSFGVVLLELLTGRKSIDKSRPSREHSLVDWALLKLNDKRRLLQIIDPKLEGQYSVRAAHKACSLAYYCLSQN

PKARPLMSDVVETLEPLQGSGGSDGAVQSVLGSGLPSYRVNRRLTTNSVHCRAIPNPKCSPAVPACRVR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	81	173	2.2e-17
Ser/Thr pkinase [Pfam ls]	81	314	9.5e-22
Ser/Thr pkinase [Pfam fs]	176	314	6.4e-16

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	68	314	2e-14
Pto [L. esculentum]	69	315	4e-39
FLS2 [A.thaliana]	73	323	4e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6548.m00152

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)