Report for 6554.m00173

 > 6554.m00173, length: 546, copies: 1 

MAMCCLELMVIIWLLPCSFLMTTSVADSTSCSVPDHSVKHSCLVFVATLRTFDRLASLYKCTPFMFEGMVLDDPK

MSSNSTLTDSLHERTIVFGLKLWVVIGISVGASLLGVLLILIVCLTLQTWIKRSRRTFKEIPITQIPSASKDIKE

VRAVDEFLPNDFVVHDGLLLAIQNEPVEPVDKDVNQFAQEDKTIQGEENSPVPLHYVDNYDVIQSVSTCEQSSSH

APVDSVLLPGLPEFSYLGWGHWFTLRDLELATNCFSKDNVIGEGGYGVVYRGRLSNGTPVAVKKILNNLGQAERE

FRVEVEAIGHVRHKNLVRLLGYCVEGTQSLAYLHEAIEPKVVHRDIKASNILIDDEFNAKISDFGLAKMLGAGKS

HIATRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRDPIDYDRPTDEVNLVDWLKMMVAHRRSEEVVD

PNLERRPSTKELKRALLTALRCIDLNAEKRPRMDQVVRMLDSNEPIPQEERRQRQNHISNNSETEPLRGKSSSGK

SDAPENEMRPPRYKNRSFPPK

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	260	327	3.1e-13
Ser/Thr pkinase [Pfam ls]	260	490	6.5e-30
Ser/Thr pkinase [Pfam fs]	330	490	6.9e-27

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	248	490	7e-26
Pto [L. esculentum]	248	491	8e-41
Rpg1 [Hordeum vulgare]	248	518	5e-29
Rpg1 [Hordeum vulgare]	248	491	1e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	97	119	in -> out

Report for 6554.m00173

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)