Report for 6556.m00131

 > 6556.m00131, length: 1162, copies: 1 

MQPRGRRLPSPRRGFGPKRSFQVSNIWAWKLLYGLFKIVGDKLAPLVIREYSSLMGVTKDLQELQDLVEEIKSGL

QSEKHDTDNDRDKYAVLKYMRTKPKLAMFQLKMANKIKTIKNRFAAIVEQRGDVNTILNAIPIDHNVHKNKIISE

PSLLGNVDDSKIHMVEAISNELNGNKFLLVLDDAWHKNQYDWERFMLYLKSGSPGSRILLTTRDQGVAEAVESTC

TYKLAFLSDEDSWNLFQQSLRLAAKGLPSEFVEIGREIIKKCGGVPLAIKILAGVLRNKKTVDAWCALRDSNMWN

VDDIEDRVFASLRLSYFHLPDHLKQCFVYCSIFPKGYKIYKHQLIGEWIANGFINPMNEIEQVEDVANDCFDSLL

KVHFLQDLEVDEYDEMEICKMHDLVLDLTRQILQGEMVSHSQNATIGNSQKCRYLSLASCNENIEVKLFSKVHAI

YISGDNFALNKPIKKRCHVRSIILESMGATNLLLPLIPKFEYLSYFRISHASCRAFPEEISHCWNLQALHVTYCR

ALTTLPESIGKLKKLRTLELSCLLDLESLPQSIGDCHNLQSFLLRGSGIREIPNSICKIKKLRVLNIMHCRSLRQ

QWSEFFGTLCNLQSINLAQIEGIHNLFSSFACHKLRTLTLSGTEITRLPQCLTLVSTLEYIDLQNCWGLLELSEG

IGNLERLEVLNLKGCSNLGGLPVGIGQLTHLQRLHLFVIGGSSEHARISGLRNLNLLTDNDLEIKIIKYVEDPDD

AEKASLKEKSGILNLTLDWSSNGAEGCSDSLEEEPLLDMEKELRVLNGLEPPSQIKKLNIYNYKDSLLEQIDPPH

FTQLTKLVLEQFPNLENLQGLARLPSLNTFVLKGMPNLVELWTSSPALESSSICFSVDSPHLKKLELGGMAGSSS

GWEVLQNLTGLESLSIYSSDLRQLGEIIRSLTSLQYLCISGCPVLAMLPEWLGGFRSLQTLVLKEIPLLASLPKS

IMLLTSLEKLAIVECDNLKELPEVVNHLTSLKELDISSCRNLSQLPEGIQHLTNLEDLSIQDCLALHKLPEGLGM

LGSLEDLMINILPVLTTLLESMQGLTSLRHINLMSCPMLTVLPESLRQLSALRSLYMQSCTGLRSLPSSIQHLTS

LQHLVISYNPTLSRHYKNRVGKDWHIISHIPVVEIRD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	66	359	2.4e-34
NB-ARC [Pfam fs]	172	359	7.6e-54
LRR [Pfam ls]	515	538	0.59
LRR [Pfam ls]	634	653	0.46
LRR [Pfam ls]	657	680	4.4
LRR [Pfam ls]	681	704	0.31
LRR [Pfam ls]	1005	1028	0.0094
LRR [Pfam ls]	1077	1100	4.8
LRR [Pfam ls]	1101	1124	0.89

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	515	538	0.026
LRR [sensitive, ls]	515	538	0.59
LRR [sensitive, ls]	539	562	0.39
LRR [sensitive, ls]	539	562	8.8
LRR [sensitive, ls]	563	585	0.38
LRR [sensitive, ls]	563	585	8.6
LRR [sensitive, ls]	634	653	0.021
LRR [sensitive, ls]	634	653	0.46
LRR [sensitive, ls]	657	680	0.2
LRR [sensitive, ls]	657	680	4.4
LRR [sensitive, ls]	681	704	0.014
LRR [sensitive, ls]	681	704	0.31
LRR [sensitive, ls]	910	932	0.33
LRR [sensitive, ls]	910	932	7.4
LRR [sensitive, ls]	933	956	0.29
LRR [sensitive, ls]	933	956	6.4
LRR [sensitive, ls]	981	1004	0.78
LRR [sensitive, ls]	981	1004	17
LRR [sensitive, ls]	1005	1028	0.00042
LRR [sensitive, ls]	1005	1028	0.0094
LRR [sensitive, ls]	1029	1052	0.61
LRR [sensitive, ls]	1029	1052	14
LRR [sensitive, ls]	1077	1100	0.21
LRR [sensitive, ls]	1077	1100	4.8
LRR [sensitive, ls]	1101	1124	0.04
LRR [sensitive, ls]	1101	1124	0.89

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	136	630	8e-39
N [N. glutinosa]	141	707	2e-19
RPP5 [A. thaliana]	144	1113	1e-18
Pib [Oryza sativa].	144	591	7e-19
I2 [L. esculentum]	154	1074	5e-55
RPM1 [A. thaliana]	164	711	1e-34
Pi-ta [Oryza sativa]	164	592	7e-26
L6 [L. usitatissimum]	166	1129	4e-18
M [L. usitatissimum]	168	1035	4e-17
RPS2 [A. thaliana]	168	890	6e-22
Xa1 [Oryza sativa]	168	1129	2e-47
FLS2 [A.thaliana]	507	1059	2e-12
RPP5 [A. thaliana]	509	1056	4e-20
FLS2 [A.thaliana]	510	1145	1e-11
Xa1 [Oryza sativa]	515	1059	1e-15
Xa1 [Oryza sativa]	515	1117	4e-13
I2 [L. esculentum]	527	1103	5e-20
M [L. usitatissimum]	573	1123	9e-12
RPP5 [A. thaliana]	623	1132	1e-20
Xa1 [Oryza sativa]	634	1133	9e-15
RPP5 [A. thaliana]	792	1132	7e-18
N [N. glutinosa]	835	1129	4e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6556.m00131

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)