Report for 6559.m00142

 > 6559.m00142, length: 939, copies: 1 

MTQSNKFEDLNGRFASLGTGMTHRSHLWGFTAKKEEAYSGENDERQQILQLIIEEIQPETSELPDGRIQVHQEID

AAVAELIEQEALDELEQLVGAQLEAPADQQNPVEQHQDEDDKLSLDNLLEQHRWEGALQRLMRMVRNGEAINGPV

PDAPPQDIYVAHPEIVILLMAEEYLRLMRSGNAAAAMRYYHDKIEIIYSGNTGSAFVNGGVLKEIQDWVNAKRDT

PSGKDEATTHMENTCQAIHDYLKLYFPAYRPQIGGKVRGHQVSKVWEFGERLGKDGGRCLACHKKVKGFNVTQLQ

NHLQGSVKRQGTQCPAINDYILILHQASNLQSASFLFFLRLDLAQVSPLPATPHGSGFRSLFSIHYRIHFLKANF

WFLTIVSNKVLPTQRVVVFLTILLNFHAFVFVAILRTFDRLASLYVLDDPKMSSNSTLTDSLHERTIVFGLKLWV

VIGISVGASLLGVLLILIVCLTIQTWIKRSRRTFKEIPITQIPSASKDIKEVRAVEEFLPNDFVVHDGLLLAIQN

EPVEPVDKDVNQFAQEDKTIQGEDNSSSVPLHYVDNYDGIQSVSTCEQSSSHAPADSVPLPGLPEFSYLGWGHWF

TLRDLELATNCFSKDNVIGEGGYGVVYRGRLSNGTPVAVKKILNNLGQAEREFRVEVEAIGHVRHKNLVRLLGYC

VEGTQRMLVYEYVNNGNLESWLHGELSQYSSLTWLARMKILLGTAKALAYLHEAIEPKVVHRDIKASNILIDDEF

NAKISDFGLAKMLGAGKSHIATRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRDPIDYDRPPDEVNL

VDWLKMMVANRRSEEVVDPNLERRPSTKELKRALLTALRCIDLNSEKRPRMDQVVRMLDSNEPIPQEERRQRQNH

ISNNSETEPLRGKSSSGKSDAPENEMRPPRYKNRSFPPK

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	612	883	3.7e-55
Ser/Thr pkinase [Pfam ls]	612	883	8.6e-55

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	600	883	2e-36
Pto [L. esculentum]	600	884	3e-57
Rpg1 [Hordeum vulgare]	600	911	2e-39
Rpg1 [Hordeum vulgare]	600	884	6e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	391	410	out -> in
putative TM domain	448	477	in -> out

Report for 6559.m00142

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)