Report for 6572.m00145

 > 6572.m00145, length: 509, copies: 2 

MAFAATKPSKSPLLILLVSGVAFLLLASAAECYGGGRHDVTRSAVARRSGVGSRRQYVRHRLTGGAVDVPHRYML

AEKGSNSTRANHTSPAASNSTPSATTTEAPAAGKHHRSHKHRVRNWIIGFVVGSLAGVVSGLAMSVLFRMALNCV

RGGYRSKSDTVIFIPKLIKSKEHLAFLEKDQDGLASLAVIGRGGCGEVYKAQLPPEREGDAPRFIAIKKIKKRSG

DGSGGQNNNLSDEESRQLDKWTRQIQSEIRTVGHIRHRNLLPLAAHVPRPDCHYLVYEFMKNGSLHNALKATTTD

TTTNDYNDNNSGEHPPPSPALPWPARLRIAVGIAAGLEYLHVSQRPQIIHRDLKPANILLDDDMEARIADFGLAK

AMPDAHTHMTTSNVAGTLGYIAPEYHQTLKFTAKCDVYSFGVILAVLGTGKEPTDKFFAQQVVDDVGIVRWLRRV

MQEGDPAAQAGVIDAAIAGAGHDEQILLVLRIAVFCTADDPKDRPTAKDVRCMLSQIKN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	184	430	9.4e-51
Ser/Thr pkinase [Pfam ls]	184	507	6e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	105	508	1e-30
Rpg1 [Hordeum vulgare]	122	507	2e-27
Rpg1 [Hordeum vulgare]	174	431	1e-18
Pto [L. esculentum]	177	500	9e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	13	35	out -> in
putative TM domain	13	35	out -> in
putative TM domain	121	143	in -> out
putative TM domain	121	143	in -> out

Report for 6572.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)