Report for 6572.m00150

 > 6572.m00150, length: 926, copies: 2 

MAETVLSMARSLVGNAITKAGEAAAAEISLLIGVNKEIWKTLTLNFPNWLFSNTHPHPPKKETKLLVPSDELKTM

QAFLMTAEEMEKKPRLLKAWVEQVRDLSFDIEDCLAEFMVHVGSKSLSQQLMKLKHRHRIAIQIRDLKSRVEEVS

DRNSRYSLISPNTDEHDTLRDEFRYWSAKNIDEAELVGFDDAKESILNLIDVHANHGLAKVIFVVGMGGLGKTSL

VKKVYHSINIVNNFSCRAWVTVSQSFVRTELLRGLIKQLLGGDSENEHFKGLQSMQRNEKVEDLVEDLKQGLKEK

RYFVVLDDMWSIDALNWLNESVFPDSNNGGSRIIVTTRDASIIQNCAYPSYLYRLEPLKTDDAKQLLLRKSNKSY

EDIKEARLRSIFPEDFPIKRRCMVNRWIAEGFVDAKFGMAMEDVGNSYFDELINRSMIQPCRFYSHGVVQSCVLH

DIMRDIAISISAEENFVFMTKGFVSGIPPENIHHLSIDGRQDSYLSFDLSHVRSLSFFYNPKEQLASLCSPQLRM

LRVLDLEFSLCRVTQNDISNIGSFCHLRYLSVKKGSYIYHIPRSIRKLQGLQTLNLKRSLITKVPAEVTELRSFR

SLRCSTLGVYSHFEFTTPETNPRRWWRSSARVSVPKGIGSLKELQILELVDIARSNKKAVHELGELTQLKKLGVA

GVTERNVSYLCEALQKLSSLCSLRVEAKPFRGLHMLEQLASPPPFLHTLKLKGSLHEIPSWVGKLEKLVKVQLVF

TKLKDTESIQVLGELPGLKCLRLILNAYIGKELVLCHGKFRGLKTLRLDSLEELRKVTFEERTSPKLETITIQDC

SSELAVCGTANLQSLEKIKYFAKGKLVKRPVVQAGQSQSAHHREDIKAAEIIEKSQTSSLEKGESSQSIPRPDVL

RTLPPISATTKLKRSLSCPASTSIVM

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	170	363	2e-33
NB-ARC [Pfam ls]	170	464	1.8e-13

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	6	772	6e-42
RPM1 [A. thaliana]	24	397	2e-25
Pi-ta [Oryza sativa]	38	366	1e-18
I2 [L. esculentum]	72	342	2e-18
Pib [Oryza sativa].	75	377	1e-28
Pib [Oryza sativa].	182	397	2e-17
Xa1 [Oryza sativa]	194	362	2e-12
I2 [L. esculentum]	385	844	5e-13
RPM1 [A. thaliana]	385	854	6e-33
Pib [Oryza sativa].	385	844	3e-50
Pi-ta [Oryza sativa]	385	683	1e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6572.m00150

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)