Report for 6577.m00234

 > 6577.m00234, length: 1385, copies: 1 

MAEVAVAAVTSLLGQIRNEGLFLGRVKSDVRFIKHEMESMRTFLEHLAETGGHHDPQVRTWMEQSMVHQHYAGIE

LSELKERAYDVAQRRKRYGVVVAPKLEAMPPASSSEAEDYDATRDKLAGGSSNSDLGRTSVLEGRFLENYCGEEL

AHWVMSTATMGSSASTTSIPSIAIVSPPIQEADDTAEMVAIHDTLASVAATHFEHSLLVYLPAVHHNPSHIRIKL

RVILCYILYQCDMEKESWHSRWGREYLSMVDEYRTSNPVYAMKCYIYKLKIADICKGDTFKRLVQNIIQIGRMVT

RLNGELERSVDAMLRLTNKKPLCILLKALDYLECGADFSDVEKYHQLRVERMPFQFKMLQLDEEKLLVATAQKLK

GHFETNIPIHLSQATYESILREVFQASNKTLQAQEGTTAPSPGVGTSHDVATATTTTTFDKDQIEEMIYIHMELQ

DMQPPQVPEAGKSLLKAELATPKPADQDDHEFTSAIEETKRKIAQVGSEIGEQFLIECLVDEIKELLGGKRTLII

IEDDKNYVSQWYGLRNSLKQLSCSGSAMIVTTQDTQRAKEICYPPREPITNSIVGMYHDILLKVTSQRVNGDASQ

IFRDILNKCCPSEFCMKTFAHALYTNPNRSNEDMCKLLGSLHSQQSSGINAEKMIKFSYDDLRKEYKSCLLYLSI

FPHGYSIRRSTLVECWVVEGLITKEDWPSAIHHAERCFDTLIDRWLIYPNDIGAAGKIKSCIVGNLVHEFITKIA

KKQHIVEPRLSHHLARHFSIFNELQLRGSDRIDRFFKNLSKSSQLSMLKVLDLEGCCCFKGKEHYLKDICSNILL

LKYLNLRGTDITKLPHQINNLYDLEVLDIRQTKVPAFATKHVLLLKLKRLLAGSSISETTMSIRDKEPLSSYVRI

PLGIKKMANVEVLFNVKVWTGQELKDIGKLWQLRKLGVVIDDKDNLLKNLLTAISDLCECLRSLSITIVPCSTKR

EGTPSIGDLPEYISRCLKYRPKLLESLCLQGTTQKGELLTLLAERFTKLVKVTLSWTSLKQKNLEGLGDLPNLCY

VRFRNKGYTDGKLTFIQQKFKNLKYFLVEGKNMRGIKFQKGAAPRLEKIVLSFTNIESLDGVGDLPRLEELELKR

NRFLLSLSEVGETLEKYMLTFKKDEFQHLKYLLAEGFSKSFETNITFEDGATPKLEKIILNSFANIMSHPGVSSL

PKFKELELKCNKPLLSSFGNANKISKVTLHSTLLKNADLQILAKIPSICCLILLGNSYDDTLLTFNKGEFPKLDL

LIVECPTITNISFTEGAAPMLEKIIWSFTKMNSLSGINNLSKLKELELIGDLVPDQVRIDINTHRKHPVLNHKQP

QPQDQENGSEQGEEEDLKFPACSWLSLKNKYWSCN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	418	702	1.4e-06
NB-ARC [Pfam fs]	655	702	1.4e-14
LRR [Pfam ls]	825	847	4.4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	825	847	0.4
LRR [sensitive, ls]	825	847	4.4
LRR [sensitive, ls]	1023	1046	7.3
LRR [sensitive, ls]	1023	1046	80
LRR [sensitive, ls]	1095	1116	0.53
LRR [sensitive, ls]	1095	1116	5.8
LRR [sensitive, ls]	1117	1140	3.3
LRR [sensitive, ls]	1117	1140	36

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	466	876	1e-16
RPM1 [A. thaliana]	509	1123	2e-16
Mla1 [Hordeum vulgare].	509	1102	2e-24
Pib [Oryza sativa].	509	1123	3e-26
I2 [L. esculentum]	512	944	4e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6577.m00234

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)