Report for 6581.m00232

 > 6581.m00232, length: 1130, copies: 1 

MKEVRELCYDIDDFVDELFHAAANAKIQRALQFKASPLRKKLPLFKTSQLQEKLSRFNASQLQKKLSWRQKIVDE

VSSFSSCLKELIMLYKRYDLGSLERRSGWESNGTMSLTLPLAEETSQRCYLGMDKDMDKLVGLLNDGQQECKVIA

IIGLCGVGKTTLAEELYQKFGFQFQCCAFLRLSRKPDMKRVLGSLFSQVRQHDPPGTGTVEVDNLSHEIKSYLND

KRYFIVIDGVWSSYIWNTINQTLPKNFYSRILITTEIDHVAQRCCVDNRKYIFKKEPFNKVESDEFFSRVHEYLK

EISSEIAQLFSGLPLMMAIVASILTRLPPSTEQWNVLISYGLIQPVETRFDNEVLSFRVHYMIIDSIRSKAVQHN

FAIAIDNHQTDVRIADKIRRLSLRFGNANDVTTPIGLRWSQVRTLVFFGPLRCTPSIAEFRVLRVLILRLSADDD

DVTYDLSEIAELLGLKYLYIDACHLNIRLPMQMRQLQYLAKLKIEARLSYVPSDIFYLPRLQQLILPSETTLPHF

TEPMKSLHTLGCFDLSGSSTESIVDLGKMVNLQNLHMTCSSGQPANLKLLGSVLNKLKNMKSLILVFTGSLDDAD

SSIMEISSDDFSVSSPPVLLTSVLPALTSLSVYIQRAPEERISFGKGGFVALKYFKLKCTVPWLKVEVDAMPNLE

KLKLRFNVGLSLQRVGLHGNNLINIEHLSRLKEIYAKVESEGSVDAGSALMTGVWNDPRNPTITIQLICGFYGEM

TRLMTKDDIILEENPDSITEDEPYMTSEASPALPRRHIAHEIPRLLPSCGGKWPTSDAAFEGHNLVNCYAGNLSI

AVIQANNSFKEQYRVESSQPFGTVIGIFDGHEAPKLPDLLVTTSSSTSKLFGLICVCRELSSSQRVTTDAISKAF

KATEEGFIELVSRQWKTDPQIATVGACCLVGAVQQKTLFIANLGNSRAVLGKVSCIGQIVAEQLSSEHIANDAWK

AKGLVQVLRAIGDAYLKYPQYSREPLNKPILSANPSIVSRVLRPSDRFIIFGSAVLWEYLSNQEAVEIVKNHQAS

GSAKMLVKAALHAAAKKHNLHYSDLLKMDRDNPRHVHEDVIAVVLFINYDQLLKGKQGRPLSIRYPRSIQHGLVP

SSRIS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	109	260	1.5e-11
NB-ARC [Pfam ls]	109	382	8.7e-10

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	2	335	1e-45
RPM1 [A. thaliana]	5	325	2e-13
Pib [Oryza sativa].	117	337	2e-11
Mla1 [Hordeum vulgare].	129	357	2e-21
Mla1 [Hordeum vulgare].	334	638	8e-12
Pi-ta [Oryza sativa]	337	757	4e-53

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Protein phosphatase 2C	838	1081	4.5e-08

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6581.m00232

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)