Report for 6582.m00138

 > 6582.m00138, length: 674, copies: 1 

MEVLRALCSDIGSFIPMIYTLLCADRESQNHLFVDSETPLMGYKIFEGSLVLLSLLLFTSLAVADIASEKQALLA

FASAVYRGNKLNWDVNISLCSWHGVTCSPDRSRISALRVPAAGLIGAIPPNTLGRLVSLQVLSLRSNRLIGSIPS

DITSLPSLQSIFLQDNELSGDLPSFFSPTLNTIDLSYNSFAGQIPASLQNLTQLSTLNLSKNSLSGPIPDLKLPS

LRQLNLSNNELNGSIPPFLQIFSNSSFLGNPGLCGPPLAECSLPSPTSSPESSLPPPSALPHRGKKVGTGSIIAA

AVGGFAVFLLAAAIFVVCFSKRKEKKDDGLDNNGKGTDNARIEKRKEQVSSGVQMAEKNKLVFLDGCSYNFDLED

LLRASAEVLGKGSYGTAYKAILEDGTIVVVKRLKDVVAGKKEFEQQMEQIGRVGKHANLVPLRAYYYSKDEKLVV

YEYVATGSFSAMLHGIKGIAEKTPLDWNTRMKIILGTARGIAHIHAEGGSKLAHGNIKATNVLLDQDHNPYVSDY

GLSALMSFPISTSRVVVGYRAPETFESRKFTHKSDVYSFGVLLMEMLTGKAPLQSQGQDDVVDLPRWVHSVVREE

WTAEVFDVELMKYLNIEDELVQMLQLAMACTSRSPERRPTMAEVIRMIEELRQSASESRDSSNENARESNPPSA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	133	156	0.073
LRR [Pfam ls]	157	177	8.4
LRR [Pfam ls]	179	202	0.31
LRR [Pfam ls]	203	224	2.5
LRR [Pfam ls]	225	248	0.046
Ser/Thr pkinase [Pfam fs]	378	589	2.8e-37
Ser/Thr pkinase [Pfam ls]	378	645	1.2e-36

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	133	156	0.0023
LRR [sensitive, ls]	133	156	0.073
LRR [sensitive, ls]	157	177	0.27
LRR [sensitive, ls]	157	177	8.4
LRR [sensitive, ls]	179	202	0.01
LRR [sensitive, ls]	179	202	0.31
LRR [sensitive, ls]	203	224	0.08
LRR [sensitive, ls]	203	224	2.5
LRR [sensitive, ls]	225	248	0.0015
LRR [sensitive, ls]	225	248	0.046

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	44	241	4e-14
Xa21 [O. sativa]	50	252	6e-22
FLS2 [A.thaliana]	52	241	3e-11
CLV2 [A. thaliana]	69	253	4e-14
FLS2 [A.thaliana]	82	254	2e-12
Xa21 [O. sativa]	97	248	3e-16
Cf-9 [L. pimpinellifolium]	107	241	1e-16
FLS2 [A.thaliana]	107	248	4e-14
CLV2 [A. thaliana]	109	244	8e-14
FLS2 [A.thaliana]	109	241	3e-15
FLS2 [A.thaliana]	109	241	2e-13
FLS2 [A.thaliana]	116	240	2e-14
FLS2 [A.thaliana]	119	665	1e-54
Xa21 [O. sativa]	119	279	3e-11
Xa21 [O. sativa]	120	464	3e-19
Cf-9 [L. pimpinellifolium]	125	243	2e-11
FLS2 [A.thaliana]	125	257	1e-11
CLV2 [A. thaliana]	132	241	8e-14
CLV2 [A. thaliana]	134	241	5e-11
Cf-9 [L. pimpinellifolium]	155	321	3e-14
Rpg1 [Hordeum vulgare]	363	651	7e-20
Pto [L. esculentum]	368	649	2e-34
Rpg1 [Hordeum vulgare]	383	651	2e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	297	319	out -> in

Report for 6582.m00138

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)