Report for 6603.m00135

 > 6603.m00135, length: 527, copies: 1 

MASSVLVFAGKSVASPTISFFANKAFNYLQNQYRKAQGIEDMKIRLQRNIPKIQSVIDIVDTDYIKESSEDLDTR

LWQLRDAVEEAEDAIDELEYYDLKEKEKDQKVSHQGSSFTKMKRKCLQSIKHISVFGKTSDCPLKRLKNAMEGLD

EAVKGVDNFLALVDQIKRTTLDNSQRVDEMNRTNMAFSVLVFAGKTVATPAISLLVNKLRDAVEEAEDAIDELEY

YELKEKEKDQKVSHQGSSFTKMKSKCFQSVKHISVFSKTFDCPLKRLKDACGSCLDPKEFEDIREAGEKITKKLR

GCPLVTKVIAGHLREHMTVQFWDRFLHEHLGYFDGSMENIMKVLKLSYFHLPPGAQVCFQYCSIFPQNHEFKKGE

LVQMWIASGLIPQTTGEAKRTQDVGEEYLIQLSRKSFVDLKLRNFHFGRNEGHEYYVMHDLIYDLATWVSSSECA

RIAYVNGSERVKRTLCHLSVVGINSFPVEAIKSFCQFKYLRTIIFEDSHDIQDDAVRAVEEVLESLKALRVVQCK

VQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	129	391	9.5e-08
NB-ARC [Pfam fs]	281	391	1.6e-21

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	280	527	4e-26
Xa1 [Oryza sativa]	292	483	2e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	202	229

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6603.m00135

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)