Report for 6608.m00145

 > 6608.m00145, length: 347, copies: 1 

MAPSNQLLFLGLWHHMLRHWPCLSSLNVKVPIPSALGDLPLLQTIQLEAMAGMYGPIPSSFAKLCHLQFLFISGT

SISGSIPDFLVKTNLSALSITNSKLNGSIPESLSLLPNLRVIDLSGNMLTGSIPPGLFHGGPVQIVAKINLTKIL

TKCSLERYQMTMAMETLTPLISHTTSSSVINPLFLFDIAKPMAKIDLSWNRLEFDMTKVRFPHHLNYLDLSHNSI

KGRVAKSLKDINLKFCNVSYNELCGEIPTGRYMAYHGADCYVHNKCLCGSPLPPCKNGKLNILTPFTIGISLLIL

PHLFPLDRIASLDQSQNRILYLKILGALKVQDICWDSDPEHGLDSRV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	66	88	3.1
LRR [Pfam ls]	89	112	5.9
LRR [Pfam fs]	113	137	6.6e-06
LRR [Pfam ls]	113	137	9.6e-05
LRR [Pfam ls]	214	234	1.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	66	88	0.12
LRR [sensitive, ls]	66	88	3.1
LRR [sensitive, ls]	89	112	0.22
LRR [sensitive, ls]	89	112	5.9
LRR [sensitive, ls]	113	137	3.6e-06
LRR [sensitive, ls]	113	137	9.6e-05
LRR [sensitive, ls]	214	234	0.042
LRR [sensitive, ls]	214	234	1.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	23	333	1e-10
Xa21 [O. sativa]	23	129	8e-11
FLS2 [A.thaliana]	27	255	2e-11
FLS2 [A.thaliana]	32	280	3e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6608.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)