Report for 6611.m00162

 > 6611.m00162, length: 503, copies: 1 

MWARFWYSKPAERARPAAFVPPPPPPTPPQYVPPEEPSAFAKLYAVAGDVVGRAKALLTTGGPVTPSDDGQRVRR

ALAQLTAPPSDPAPAAPQKDSSSGLSSTAVVWIIVAAGVVGAVLALCVLTLWIRRCRRQRRRRRQAQPFPLPPPI

YNPNPYYKGDLPPQPFVAQQPPSDHYFIQHQHPTPPQTSGTFSDAGSERPHSIDILTELPTGGSLSYDQLAAATD

GFSPDNVIGQGGFGCVYRGTLQDGTEVAIKKLKTESKQGDREFRAEVEIITRVHHRNLVSLVGFCISGNERLLVY

EFVPNKTLDTHLHGNKGPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHDFEPKVADFGLAKY

QPGNHTHVSTRIMGTFGYIAPEFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVAWAKPLLSEAT

EEGNFDILVDPDIGDDYDENIMMRMIECAAAAVRQSAHLRPSMVQVRFLITTP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	227	426	1.1e-57
Ser/Thr pkinase [Pfam ls]	227	500	3.5e-53

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	198	424	2e-35
Xa21 [O. sativa]	199	313	4e-15
Pto [L. esculentum]	218	496	3e-57
FLS2 [A.thaliana]	219	465	7e-37
Rpg1 [Hordeum vulgare]	220	424	2e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	106	128	out -> in

Report for 6611.m00162

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)