Report for 6618.m00250

 > 6618.m00250, length: 964, copies: 1 

MVEPVTASAAVGWGISAVGWVVSPIITKLLGEGFSFLGFETKEKLKELETKVLELQMLREVVEESPHRARLMKWS

EELKSALYDAEDIFDDVEYNRLERRILSESDDMQESDFRARPALSCVKGKQLLIIYARNEYGQNSTLDKKVCGTS

SDHHGMSKSKLKKILGNIEKIINEGHDILKLLDLKKAVATNSRAAVTTSAPPNVVFGRDEDRNKVIAMLHDRSGD

EQPNSSSALNYSVIGIYGIAGSGKSTLAQYVIAHEKELRREKSPGHFDLIMWVHVSQKFSVNAIFTEMLDAATER

GGHQFSNLDTLQQKLEEELNGKKILLVLDDVWYHDSVSQLQLEKIVSPLNVGSAGSKILVTSRSKDALVALGAVR

RIPISELNDSVFLELFMHSALSGANIDERDRNVFAEIGRGIANKLRKSPLAAKLVGGQLRMRPDVDFWRDAGNRD

LLKDTRGALWWSYQHLDEQVRRCFAYCSIFPRRHRLKREELIKLWVAEGFIETTGEGGEEEALAGKYFEQLVSSS

FLQPGVNQEGVFHSFEYFTIHDLLHDIAEEVSRSDCFRVEDGWKGVIPPNVRHISIETYSRAIIQKVLEMENLRT

LIIYSVKTEMLIEEKEFEDMFTRLRKLRVLHLVTATTSNTFSFPASIEKLKHLRYLSLQTGEAVKLHLSSQTDES

VKLILPGTFTKLYHMQVLDFIGNTDLVFSAGKEMSNLINLRHLISFTSMNFPNIGRLTLLQTLKFFTVKKEPGYE

LQQLKHLKNLQGKLQIDGLQNVHSKNEAVEANLAGKECLKELSLFWEDESSNPNEQEEVIEGLQPPMGLQNLEIF

RYQGSRYPSWMVDKQTGLKNLRVLALSNCRQLKPAPELFELLVHLQSFSLCGCSWDTLPDNMEQLMSLQNLMIYL

CTNLLSLPTLPRSLAHLVIGNCDPWFTRSCQTIAHENWQKVQHIPNKEIFCDGALFAILRQRNH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	189	506	4.3e-38
NB-ARC [Pfam ls]	189	506	2.9e-37

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	45	866	1e-68
RPS2 [A. thaliana]	61	694	7e-23
Pi-ta [Oryza sativa]	74	855	2e-16
Xa1 [Oryza sativa]	148	922	9e-82
Pib [Oryza sativa].	185	703	5e-24
Mla1 [Hordeum vulgare].	208	738	2e-28
RPM1 [A. thaliana]	238	905	1e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	40	65

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out
putative TM domain	5	27	in -> out

Report for 6618.m00250

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)