Report for 6632.m00166

 > 6632.m00166, length: 499, copies: 1 

MADAWAASPPSPTAPSPFAADDLVDARLAPWPPFAPWPAPGQLHHNRRGGGHPNPLFTILPASALAIGVVLLVAV

VVILVMTRRWKPGTVDGAGGASCNGDKPGGAPASSCGSSVRGYNNSRYYAAAAAGCIYGGRLGFSVQPRNRGAQV

FTYRELESATDGFSECNVVGRGAYGVVFRGRLGDGTTAAIKRLKMDGRREGEREFRIEMGVAITDQVDLLSRMHS

PYLVGLLGYCADQSHRLLVFEFMPNGSLKSHLHRRALAPAEQPPPLDWQTRLGIALDCARALEFLHEHSSPAVIH

RDFKCSNILLDHNYRARVSDFGMAKLGSNKANGQVTTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG

RVPVDTKRPPGQHVLVSWALPRLTNREKLVQMVDPALIGQFSLKDLVQVAAITAMCIQTKADYRPLMTDVVQSLI

PIVKSPLMSCTSTPLRPAHGHHHVVYMSPSRGSSNGGALETRCVMHGLD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	163	385	1.8e-48
Ser/Thr pkinase [Pfam ls]	163	451	4.2e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	139	462	6e-22
FLS2 [A.thaliana]	151	452	1e-31
Pto [L. esculentum]	151	449	9e-50
Rpg1 [Hordeum vulgare]	151	454	6e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	58	80	out -> in

Report for 6632.m00166

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)