Report for 6634.m00092

 > 6634.m00092, length: 914, copies: 1 

MATLLDSLMVSIVKRLQDIITAEAILVLGVKEELRELQRTMSHIQCFLIDAEQRRSEESAVNNWFAELRDAMYEA

EDIMDLVSFEGSKLLAQHPSSSRNSTGCTGLSMFSCLPNIQRHHKIAVRIRNFNFELEKIIKMAERYLKLRNMQP

IVAVPSVRLMKTCHLVEPNLVGKETLHDCRRLVKLVLAHMDQKVYKLGIVGTAGVGKTTLAQKIYNDNKIKGIFS

KQAWICVSQDYTEVDLLKEVLRAFSVYQEQGETISELKSKLATTVKDMSFFLVLDDVWNPEVWTYQLRTPLLAAT

NGVIIITTRHDTVAQAIGVEEMHHVELMSTDVGWELLWRSMNFVREKEVQHLRDIGMEIVRKCGGLPLAIKVIAS

VLATKDKSESQWRKVINRSAWSMGKFPIELRGALYLSYDELPRHLKRCFLYCALYPEDWLMLRDDLIRYWIAEGF

VEEQEGQLLEDTAEEYYYELISRNLLQPVHLYFNNIICNIHDLLRQLAWHLSGDEIFYGDPQSLDANTLSKVRYA

SISTHDYSVILSDVDKEYIRARTLHIHCGKSTLVENTIFKRFPRIRILDLTGSPINKIPDCLGDLIHLRLLDLDE

TKINCLPESVGSLKYLQILNLQRCVSLHSLPLAITKLSNLRRLGLRHTPITEVPQGISRLKFLNDLGGFPIGAGR

DSTKMQDGWSLEELRPLSQLRCLDMIKLERAIPCGGTDSLLKYKEHLRVLYLCCTGQIDQEYSEENASNNEKIFE

QLTPPSNLEDLSIVRFFGRSYPNWLCATMLSSLKHLELLGCKSCMHLPPIGQLPYLKYLKILGATVAKIGPEFVG

FTVDNPGSIESTAFPKLECLVISDMPNWEEWSFAEKAASTLEEGHDDGDDARQIRENFKVASSTLSGEAVPLWLP

QAKGSPTTTWTGGL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	153	456	1.1e-62
NB-ARC [Pfam fs]	197	456	5.2e-66
LRR [Pfam ls]	569	591	3.6
LRR [Pfam ls]	592	614	0.93
LRR [Pfam ls]	639	661	0.23

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	569	591	0.33
LRR [sensitive, ls]	569	591	3.6
LRR [sensitive, ls]	592	614	0.085
LRR [sensitive, ls]	592	614	0.93
LRR [sensitive, ls]	615	638	0.7
LRR [sensitive, ls]	615	638	7.7
LRR [sensitive, ls]	639	661	0.021
LRR [sensitive, ls]	639	661	0.23
LRR [sensitive, ls]	721	753	7
LRR [sensitive, ls]	721	753	76
LRR [sensitive, ls]	782	804	2.2
LRR [sensitive, ls]	782	804	24

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	11	815	1e-53
RPM1 [A. thaliana]	13	814	3e-60
I2 [L. esculentum]	34	856	2e-88
Pi-ta [Oryza sativa]	58	666	2e-35
Xa1 [Oryza sativa]	120	819	1e-45
RPS2 [A. thaliana]	133	851	4e-39
Pib [Oryza sativa].	167	641	3e-39

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6634.m00092

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)