Report for 6634.m00102

 > 6634.m00102, length: 958, copies: 1 

MATILGSLIGSCVNKLQGIITEEAILILGVEEELRKLQKRMKQIQCFLSDAERRGMEDSAVHNWVSWLKDAMYDA

DDIIDLASFEGSKLLNGHSSSPRKTTACGGLSPLSCFSNIQVRHEIGDKIRSLNRKLAEIEKDKIFATLKNAQPA

DKGSTSELRKTSHIVEPNLVGKEILKVSRNLVCHVLAHKEKKAYKLAIVGTGGIGKTTLAQKLFNDQKLKGSFNK

HAWICVSQDYSPSSVLRQLLRTMEVQHRQEESVGELQSKLELAIKDKSYFLVLDDVWQHDVWTNLLRTPLHAATS

GIILITTRQDIVAREIGVEKQHRVDQMSPADGWEQLWKSISIQDEKEVQNLRDIGIKIIQKCGGLPLAIKVIARV

LASKDKTENEWKRILDKNVWSMAKLPKEIRGALYLSYDDLPQHLKQCFLYCIVFPEDWTIHRDYLIRMWVAEGFV

EVHKDQLLEDTAEEYYYELISRNLLQPVNTSFDKSQCKMHDLLRQLACYISREECYIGDPTSMVDNNMCKLRRIL

VITEKHMVVIPSMGKEEIKLRTFRTQQHPVGIENTIFMRFMYLRVLDLSDLLVEKIPDCIGHLIHLRLLDLDRTC

ISCLPESIGALKNLQMLHLHRCKSLHSLPTAITQLYNLRRLDIVETPINQVPKGIGRLKFLNDLEGFPVSGGSDN

AKMQDGWNLEELADLSKLRRLIMINLERGTPHSGVDPFLLTEKKYLKVLNLWCTEQTDEAYSEENASNVENIFEM

LTPPHNLQDLVIGYFFGCRFPTWLGTTHLPSVKSVILANCKSCVHLPPIGQLPNLNYLKIIGASAITKIGPEFVG

CREGNLISTEAVAYPKLEMLIIKDMPNWEEWSFVEQEEEEEVQEEEAVAAAKEGGEDGTVASKQKGKVALSPRSS

WLMPCLRRLDLWDCPKLRALPPQLGQTNLKELLIRYTSCLKTVEDLPFLSGLLLVERC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	153	455	8.2e-62
NB-ARC [Pfam fs]	196	455	2.8e-66
LRR [Pfam ls]	590	612	0.28
LRR [Pfam ls]	905	925	5.4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	567	589	0.51
LRR [sensitive, ls]	567	589	5.6
LRR [sensitive, ls]	590	612	0.026
LRR [sensitive, ls]	590	612	0.28
LRR [sensitive, ls]	613	636	0.88
LRR [sensitive, ls]	613	636	9.6
LRR [sensitive, ls]	637	659	0.55
LRR [sensitive, ls]	637	659	6.1
LRR [sensitive, ls]	781	803	2.6
LRR [sensitive, ls]	781	803	28
LRR [sensitive, ls]	804	827	4.8
LRR [sensitive, ls]	804	827	53
LRR [sensitive, ls]	905	925	0.49
LRR [sensitive, ls]	905	925	5.4
LRR [sensitive, ls]	928	950	3
LRR [sensitive, ls]	928	950	33

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	4	687	3e-58
RPM1 [A. thaliana]	13	641	1e-59
I2 [L. esculentum]	34	856	3e-93
Pi-ta [Oryza sativa]	58	662	2e-41
Xa1 [Oryza sativa]	120	915	2e-51
Pib [Oryza sativa].	166	810	9e-40
RPS2 [A. thaliana]	182	643	7e-42
N [N. glutinosa]	196	929	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	119	139

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6634.m00102

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)