Report for 6649.m00178

 > 6649.m00178, length: 667, copies: 1 

MELLQEKNIHVSQRDDKAKWIIDNYSNIRSFTEHDIEKITSNYSTLIGKGGFGEVFRGVLDDEDDVVAVKRYIRG

DLREEFMEEIRIHAQMSHKNIVKLIGCCIGKNRLMMVTEFISNGNLEDALHNSDIFIPLSTRLGIAMGCAKALSY

MHSMHLSSSSLICHGDIKPANILLDANLTAKVSDFGISKSLSGGITRWTSNVKGSIAYMDPIYYREGRVTSKSDV

YSFGAVLLELIARKSMKEGGISCEAFRQACAKGKGLRELLDIEIAEECNMNILEEIAKLATKCMIVDNIKKRPQM

NDVAEHLRTWIFQVRNGGHEKPAWESTLDKVHDALKKGMQSAGIFSSSIISNPQKHNFGIFRSNDVRIFTKKDIS

VITNNSSHLLGKSTFCNVYKGILDDNTLVAVKTYSVFSYDEDLRNSISTSITIMSKIAHRYIIKLLGHCSDADHL

PILIYEYAAKGSLNDILYSKEDFPLELRLKIAVKTAEALEFLHSSAFCVIRHGNIKPSNILLDSNLMPKVAGFTS

SRRIAENNNDQVASMEFTHIHYMDPIHIQSGHFTVKNDVYSFGVVLFELISRKKPVYHCHDNNRRLIPEFIRAYE

TAKSGKAMFDEGIMAEEDIAVLEEIGRLAMECVSLEIDGRPTMKEVAERLKMIRRMKESSAMGAARC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	41	238	1.3e-43
Ser/Thr pkinase [Pfam ls]	41	311	1.3e-41
Ser/Thr pkinase [Pfam ls]	379	652	3.8e-19
Ser/Thr pkinase [Pfam fs]	393	588	1.2e-24

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	22	307	6e-30
Rpg1 [Hordeum vulgare]	29	307	1e-23
Pto [L. esculentum]	31	303	2e-39
Rpg1 [Hordeum vulgare]	31	659	1e-37
FLS2 [A.thaliana]	369	654	2e-24
Pto [L. esculentum]	369	659	7e-31
Rpg1 [Hordeum vulgare]	369	663	1e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6649.m00178

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)