Report for 6649.m00183

 > 6649.m00183, length: 642, copies: 2 

MTMRTVHDNPNIRIFTEGDIERITNNYSTLIGKGGFGEIFRGVLDDEDDMVAVKRYIRGDLRDEFMEEVRIHAQV

THKNIVKVIGYCIGKKSLMMVTEFISNGNLEYALHNSGISIPLGTRFGIAIGCVEALSYMHSMHLSSGNLICHGD

IKPTNILLDGTLIAKVADFGLSKSLSGGITRYTENVKGSIDYMDPIYLSAGRVTRKSDIYSFGVVLLELISQKRV

KEKGGINLIAAFNQAYANGKGFRGLLDTEIANECNMKILEGIGKLAVECVAIDANKRPNANDVEKRLLMLWAAQH

GKEENIIRRLYRRSPPEIISSSSSNKLGNARIFREGELKKVTENYSSHLATGSSYNIYKGTLEDNTLVAVKKYFD

RYEAGKEEFRSRVAMVIMSPVVHKNITKLLGICLEANPPTLVYEYAARNLSDILHCKEDFPLELRLKIASKTSRV

LEHLHSSRIALRHGDVMPSNILLDDGFVPKVTAFTLSTRFTEDNATRMSMVKGDGNYMDPYYRHTNLVLLKSDVY

SFGVVLLELITRKQPAGDCPEKYGLVSEFARAYKMNKSGKAMFDERIATEENIPVLEEIGKLALHCINLKLSKRP

TMKEVAERLKKIRRWCNGHEGYRMLIQPECTMALSRRSQFVD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	25	294	2.6e-43
Ser/Thr pkinase [Pfam fs]	31	294	4.3e-43
Ser/Thr pkinase [Pfam ls]	343	605	3.6e-14
Ser/Thr pkinase [Pfam fs]	357	482	8.8e-12
Ser/Thr pkinase [Pfam fs]	521	605	4.2e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	12	295	4e-28
Rpg1 [Hordeum vulgare]	15	612	7e-47
Pto [L. esculentum]	19	288	9e-39
FLS2 [A.thaliana]	292	617	1e-19
Pto [L. esculentum]	321	610	1e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6649.m00183

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)