Report for 6654.m00169

 > 6654.m00169, length: 996, copies: 1 

METAVLSTLLNMLGPKLYTFLQENHELRRNLEHDIRYIRNELRMIGAVIDEHERGQMNHGGPLQGAWIHGARELA

YDMEDCIDRFMHRMTSGHRLATMAVRTKFATVIQKLRKKSEDLSKLRANYTTAGNGNGDCQASTSGTMSSFETTH

IPTADTVPVGMDGPRDEILELIMETQSQPNQLKVISLVGFGGLGKTLLAKQIYENTTICTQFEPQAWVSAAGKSA

RDVLKEILCQLGFQSQAQEDDVSKLITSLKKCLHSKRNEKVTTTRWKVSRVPTNTGKFMFLPKFFIVIDDIQREY

WNSTIKDAFPVDTGSSSIVLVTTAIHSIANACSSGNGHVYMMSTLDKKYSRKLFLREASWGDYPPGSETVLSTKC

DGLPLALVSTAQFLKSKGQQLPQEYAKLCGNLGMHLEREDTLERMKHVLVHNYTSLPGHVIKACLLYFGIFPSGH

PVRRGKLIRRWSAEGLVEADPLRSSLDVATDYFNELINRSIIQPVATSSNTEVKTCQTHGMMLEFILHKSMCDDF

ITLLYDQACLPDKIRCLTVQHNSTRRGRMNSDIDLSHVRSLTIFGEAEDSVLEFSSYELLRVLDLEECENLKDEH

LRKICKLLLLRYLSLGGTVTMLPKEITKLKFLETLDVRRTKIKVLPIQVIKLPCLTHLFGNFKLQDVGQKISKLQ

KYLSEKSKLETLAGFFANNDQGFPQLIDHMKNLAKVKIWCESETPSNSSSNTIHLSKAIQVFIQRGTNMNDVRSL

SLNFGGCFQDQENMLKFSLEDSCYLSSLKLKGKINILPPFVTLLKGLTELCLSSSDKLNRDVLAALSNDRVPLKS

LRRLCIMVQTMTEPEIQQGALPNLESFRLLCKDLNGLCGINIQYIGPECLKEVALDKRISEETKKKWKETVKNHP

RWPKVSFVNTGEVGQMQNMEVAQPTEDAAALALAAGSLRPVPVFRRPKADQERTLDLCSMGQTSRESCSNTEPYF

KTNGTSPGKLNPVNDECHHFC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	141	262	3.1e-09
NB-ARC [Pfam ls]	141	472	1.3e-16
NB-ARC [Pfam fs]	371	472	3.5e-12

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	4	713	7e-33
Mla1 [Hordeum vulgare].	5	835	1e-60
RPM1 [A. thaliana]	16	658	6e-34
Pi-ta [Oryza sativa]	67	658	1e-53
Xa1 [Oryza sativa]	87	711	6e-17
RPS2 [A. thaliana]	153	669	7e-13
Pib [Oryza sativa].	159	676	1e-54

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6654.m00169

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)