Report for 6658.m00158

 > 6658.m00158, length: 1530, copies: 1 

MAGLFATLAIRKALDKLSSILPARSLLASSSSAAAMVRQGQEQDLEDLRMLERTMHRIHATLKDAEQHWDIRDES

AKLRLKELKELAYDAEDVVDEYEYEVNRCKAEALQLSASVASHKQELALKARKLIKRFHEIQYYSDNFTLSENDG

ERRFAPNIGTLPKTSSVIYAPKIIGREQDKDNIVEKLLSMTSDSVATPVSILAIVEQFDPTYITKSIISSLEKDN

CGLSEVCSPHETLAKRIKHKMVLLVLDDVWNERRDCWDLLCEPMNTAKLCMIIVTTRSERVAKLVQTMPNFYSLN

CLSSEESWSLFKQVAFTVDNGNTPNLQEIGMSIVKKCKGLPLAIKTLASMLCYETCEQRWKDVIESELWDLEQPR

NEVLPSLELSYKNMPIYLKRCFVAISLYPKDYIFDRNQVLQLWKVLDLLQSDRHNNETEIGNRYLDELVERSFLL

FLLTKVDGHYYKKYLMHDLIHDLACFLSADEFFRLDDSSTSIEIPQNARYISIQNLASSEISITPLALRAIIVLP

RAEVNINNSEALFSKCEKLRALVLGEGCLDQNLPALMGRLKLLRHLKLVTSFFSHSDPCWDHVDGLRGIGHLNNM

LTLPPIHLRNDRIIELRSLNKLRELRIGGLGLHLTIDGAKDARLQSKRHLQLLSLDFGDCCPDHNQQVQLLESLR

PHRNLGELIIMNYEGLKYPYWLGDASFSNLSQIELGYSHIQYLPTLGDLPSLVSLHIHDMMIVERIGWEFCSHFH

GVKGFPSLTQLRFNWMHKWSEWSGIVDGGFPRLRTLSICHAHSLRLDNIESFPFRSLITLELDKCCCITTIPAST

SLRTLRIDRRSFDLRRSSTDGPRLNRLPSLECLTVICHDTTSILLQPQHLPSLKKLNLSCEKLQYCDGLSGLTSL

SVLKPWGCPKLPIHSLIPQLQLQTLDVRCSPGIEWAANGPVQPFIQAGPSKPKPLIHGISSMEAMGKYRCGVPCS

WSLDLGKATAHGTNAHNLFGEMSSQGEVSQEDLKISKAVPINSPMNKEEKMMDEALDQILEKLEQMKTKRRCNEK

IDQILEKFDEIEANRRKSFEETTNIIKATTSIFNSASSSTPPTSPTPVLAKCSWACSNSASAYTTTSASHNIDVP

TPTVAMGLQVSLNHGIGTTTVTPTKCLVNCFDNDTGVNHAILEESFASTTAAATMETVVSEDKACSIFINTTDLT

KVMHSRCTTISLKDNIGTIQAEVAFPFPFHTLNMIAAPKEPMLVMAEKLDSIFCIKLVMPNGCLMKCLKSDKRLL

AGLPKRKPWPLPWSGGVTSVCLIPPWPPPIRLKQCRSWKIGVAISLFAWKAQWDFVSYRSCTVVEISRMHELALL

VLLTQDPSDDKRDDLLPASKNPFTSYMMAQYFEVIESRLISDISHLDGNNVQDTWDCKGILVILEDGTSKWRMQG

IKPSASKNIISAWKNVFIPTIRSVLEGDKQFCIYKPNISTYLLCHVAMPTILGRLKTRGTIVKLVVKYEHCEEGI

LSWSGILSLLITRKGNSDGNDLIILIIQEL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	156	429	4.9e-41
NB-ARC [Pfam fs]	236	429	9.8e-51
LRR [Pfam ls]	704	725	4.2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	704	725	0.38
LRR [sensitive, ls]	704	725	4.2
LRR [sensitive, ls]	726	750	3.1
LRR [sensitive, ls]	726	750	34
LRR [sensitive, ls]	806	828	1.1
LRR [sensitive, ls]	806	828	12

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	27	921	8e-76
Mla1 [Hordeum vulgare].	37	571	1e-24
RPM1 [A. thaliana]	84	573	1e-29
Xa1 [Oryza sativa]	118	915	3e-42
Pi-ta [Oryza sativa]	209	517	5e-17
N [N. glutinosa]	213	833	1e-11
Pib [Oryza sativa].	238	491	1e-18
RPS2 [A. thaliana]	240	585	1e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	76	98

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6658.m00158

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)