Report for 6670.m00159

 > 6670.m00159, length: 740, copies: 1 

MAELMATMVVGPLVSMVKEKASSYLMEQYKVMEGMEEQHKILKRKLPAILDVIADAEEQAAKHREGAKAWLEELR

KVAYQANDVFDEFKYEALRRKAKANWQYKMLGMDVIKLFPTHNRIVFRYRMGNKLRMILNAIEVLITEMNAFRFK

FRPEPPMSSMKWRKTDSKISEHSMDIANRSREEDRQKIVKSLLSQASNGDLTVIPIVGMGGMGKTTLAQLIYNDP

QIQKHFQLLLWVCVSDNFDVDSLAKSIVEAARKQKNCNERAEFKEVVNGQRFLLVLDDVWNREASKWEALKSYVQ

HGGSGSSVLTTTRDKTVAEIMAPPKEVHHLKDLNENFIKEIIERSAFNSEEEKRQSELLEMVGDIAKKCSGSPLA

ATALGSTLRTKTTKKEWEAILRRSTICDEENGILPILKLSYNCLPSYMRQCFAFCAIFPKDHVIDVEMLIQLWMA

NCFIPEQQGECPEISGKRIFSELVSRSFFQDVKGIPFEFHDIKDSKITAKIHDLMHDVAQSSMGKECAAIDSESI

GSEDFPYSARHLFLSGDRPEVILNSSLEKGYPGIQTLIYSSQNEDLQNLSKYRSLRALEIWGGIILKPKYHHHLR

YLDLSCSEIKALPEDISILYHLQTLNLSHCSNLHRLPKGTKYMTALRHLYTHGCERLKSMPPNLGHLTCLQTLTC

FVAGACSGCSDLGELRQSDLGGRLELTQLENVTKADAKAANLGKKKKLTELSLGWADQEYKEAQR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	164	459	2.1e-68
NB-ARC [Pfam fs]	187	459	4.5e-69
LRR [Pfam ls]	598	620	1
LRR [Pfam ls]	621	644	0.25

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	598	620	0.033
LRR [sensitive, ls]	598	620	1
LRR [sensitive, ls]	621	644	0.0078
LRR [sensitive, ls]	621	644	0.25
LRR [sensitive, ls]	645	668	1.5
LRR [sensitive, ls]	645	668	47

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	9	692	3e-36
Pi-ta [Oryza sativa]	33	625	1e-21
I2 [L. esculentum]	40	732	8e-87
RPM1 [A. thaliana]	68	734	5e-49
Pib [Oryza sativa].	68	334	2e-12
Pib [Oryza sativa].	164	650	7e-32
Xa1 [Oryza sativa]	181	732	1e-58
M [L. usitatissimum]	183	673	3e-11
RPS2 [A. thaliana]	186	725	3e-28
N [N. glutinosa]	189	693	6e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6670.m00159

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)