Report for 6682.m00128

 > 6682.m00128, length: 760, copies: 1 

MLPRCLVAVAVLLLVASHAARGEERRRLLLARQDVLALHGLRGSIGVRAEYWPVKRYPCSWTGVVCRAGRVAELR

LTGLRRTRAGARSQGFTVDPLRELTALEVFNASGFPLPGRIPAWFGTGLPASLEVLDLRSTSVNSTLPADLGMSG

NLTTLDLAGNSISGSIPATLFLIKGLKFLDLSDNNLTGELPNVSISAGDGTGVFNASGNSLYGAIGDVLGPLRKR

FRQVDLSRNYFTEVIGTGFGNSSDGAVDINMNCLSGSSQRSQGDCEAFYKRIGVSLPEPPNALPSPSKKGVKWKY

VLAGVLAAAAFLVVLFLVALVFCLMKSGGRRPRGRGLEQNEEGIRSGRRSSSVNPVMLSSMAASPAANGAVKGLP

TIVDEFTYEQLHNVTGGFGDDNLVKHGHSGAIYLGELESGFNVVVKKVDLKSSNKNLGELGFLAKNSHGRIVPLL

GHLATDEEELLVYKYMAKGDLTSALHRKSVDAEEGLRSLDWITRLKIAIGVAEALCFLHDECSPPLVHRDIQASS

VLLDDKFEVCLGSLSDVCTQQSEGSRSFFSRMLRSSKSLDKNASGPPASCSYDVYCFGKVLLELITGNFGVSGSN

DTGSEEWLARTLDFIDAHDKEGLSNIVDPSLVVDEDHLEEVWAVSIVAKTCLNPKPSRRPLARYILKALENPLRV

VREELQSNSSLTSTSSRSSWHFAFHGDSRRSSELRPTLGQSARKQSVKSQGSDEDEDEEEDSFSFKRASREILPD

PVELEKDAVV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	151	174	0.15
LRR [Pfam ls]	175	199	0.83
Ser/Thr pkinase [Pfam ls]	393	671	4.5e-11
Ser/Thr pkinase [Pfam fs]	402	537	2.8e-13

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	127	149	0.84
LRR [sensitive, ls]	127	149	26
LRR [sensitive, ls]	151	174	0.0048
LRR [sensitive, ls]	151	174	0.15
LRR [sensitive, ls]	175	199	0.027
LRR [sensitive, ls]	175	199	0.83
LRR [sensitive, ls]	225	248	0.41
LRR [sensitive, ls]	225	248	13

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	59	272	1e-11
Xa21 [O. sativa]	59	261	2e-13
FLS2 [A.thaliana]	85	669	5e-29
FLS2 [A.thaliana]	88	249	4e-11
FLS2 [A.thaliana]	88	261	9e-11
Xa21 [O. sativa]	92	484	1e-13
Rpg1 [Hordeum vulgare]	380	671	8e-14
Rpg1 [Hordeum vulgare]	380	614	6e-11
Pto [L. esculentum]	381	675	3e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	300	322	in -> out

Report for 6682.m00128

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)