Report for 6706.m00177

 > 6706.m00177, length: 435, copies: 1 

MPPPPLLLAAAVAAAALPPPAAARRHASPPPPQPQHPDKAGGGNGVLTTALVAAAVLLVVLLLYLCVAIAVRRYR

GRGPAPAAGPTNAAARAAAFLRRNGLHQHRPSFTYEQLRAATAGFDPSRKLGDGGFGTVFLAYLPPGGRPAAVKR

LHVPPSPSPSFPSASATITKSFCNEVLILSALRHPHLVRLHGFCADPRALLLVYDFVPNGTLSHHLHRRCGVTAA

APPPPPLPWRTRLAMAVQIASALEYLHFGVKPAVVHRDVTSSNIFVEADMRARLGDFGLSRLLSPPDACATGAGR

ELVCCTAPQGTPGYLDPDYHRSFQLTEKSDVYSFGVVVLELVTGLRPVDVGRERRDVTLADWVVAKIQVGELREV

VDQPVLGEGAGVMASVEAVAELAFRCVAPDKDDRPDAREALAELRRIQGMLPEVSGLKGS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	120	347	2.5e-44
Ser/Thr pkinase [Pfam ls]	120	421	3.8e-40

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	53	424	3e-29
Rpg1 [Hordeum vulgare]	105	422	8e-16
Pto [L. esculentum]	108	419	2e-37
Rpg1 [Hordeum vulgare]	108	422	2e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	46	68	out -> in

Report for 6706.m00177

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)