Report for 6720.m00107

 > 6720.m00107, length: 969, copies: 1 

MAGLISSGIIKWTASKLSSLVSASPGASASNEQSSALRDVRTLQRTMARIQRTLATTDEHSIRDASERLHLRELQ

QFAYDAQDAIDLYKFELLRRRMDDPNSHGDGGSSRKRKHKGDKKEPETEPEEVSIPDELAVRVRKILERFKEITK

AWDDLRLDDTDTTMQDEEHSMLPLPTTPYVDEPTIFGRDEDKEKIIKMLLSVGGANEGDVSVLPIIGMGGVGKTA

LVQLVYNDRRILNRFDLMGWVHVSENFDLKSIMRKIIMSFTKKPCQMTQMDQLQYMLIEQVVGRKFLLVLDDVWN

ERKDIWDALLSAMSPAQSSIILVTTRNTSVSTIVQTMHPYNVSCLPFEESWQLFKQMAFLHQDESMKTDFEVIGR

KIVQKCAGLPLAVKAIASALRFEENEEKWNDILESEQWELPTTEDTVLPALKLSYDQMPIHLKRCFVFFALFPKR

HVFLKENVVYLWISLGFLKRTSQTNLETIARCLNDLMQRTMVQKILFDGGHDCFTMHDLVHDLAASISYEDILRI

DTQHMKSMNEASGSLRYLSLVVSSSDHANLDLRTLPVISKLPESICDLLNLKILDARTNFLEELPQGIQKLVKLQ

HLNLVLWSPLCMPKGIGNLTKLQTLTRYSVGSGNWHCNIAELHYLVNIHGELTITGLGRVTKVDDAQTANLINKE

HVQTLRLDWSDGFYSSECDHNSSHIDVKATPELAEEVFESLKPTSNLEELEVADYFGYKYPSWFGGSAYSQLAKI

TLWKQGCKFLPTLGQLPQLRKLVVIRMEEVERIGQEFHGENSTNRFPVLEELEFENMPKWVEWTGVFDGDFPSLR

ELKIKDSGELRTLPHQLSSSLKKLVIKKCEKLTRLPTIPNLTILLLMGNLSEEIHNSLDFPMLQILKEWIEWQQS

LIDKEDKQQPEFDNASYDQEALGALSDNSEDDVEVFNEDEDDDFYDEMLEVGQSSGTAINDDDGSNDAV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	169	473	4.1e-77
NB-ARC [Pfam ls]	169	473	1.1e-77
LRR [Pfam ls]	575	597	6

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	575	597	0.19
LRR [sensitive, ls]	575	597	6
LRR [sensitive, ls]	823	843	1.1
LRR [sensitive, ls]	823	843	35
LRR [sensitive, ls]	845	867	0.75
LRR [sensitive, ls]	845	867	24

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	40	854	1e-101
RPS2 [A. thaliana]	61	861	6e-28
Mla1 [Hordeum vulgare].	64	784	1e-39
Pi-ta [Oryza sativa]	64	625	3e-24
Xa1 [Oryza sativa]	99	868	6e-65
RPM1 [A. thaliana]	179	636	1e-47
Pib [Oryza sativa].	181	603	3e-26
M [L. usitatissimum]	185	524	5e-18
N [N. glutinosa]	185	864	5e-14
L6 [L. usitatissimum]	209	523	1e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6720.m00107

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)