Report for 6737.m00174

 > 6737.m00174, length: 956, copies: 1 

MAASTGVVSSLLSKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWRNKVRELAYDVE

DCIDAFAHHHRLSRGDADPGGLIRRAARNMKKLRASYRAADQIHELKARIMEVSDRRLRYKLDEAASAAPAPALA

IDPRLPALFAESKGLVGIEGPRSTLVSWLMDGEGQLKVISIVGFGGLGKTTLAKEVNHAVGAHFQLKAFVSVSRN

LNPKKLICDVLSQIMDQKDYGKKDYGKLEVEQLIPILREHLADKRYLIIIDDIWRIQAWDLVKSALHDNSCQSRI

ITTTRISTVAESCCSTLKDRIYYIEPLNEVESRELFFKRIFATEHGCPPHLEEVSNEILKKCGGLPLAILSIASS

LANKPDIKEQWEMVKKSIGFALEGTPTLEGMNKILLFSYYDLPTHLKACLLYLSIFPEDQVIESDKLVWRWMSEG

LIVGEMGKNLEQAGQIYFNELINRSMIESVGVRYDGKVLACRVHDMVLDMIISLSAQENFVTILHGHEDKFAGEK

IRRLSLRCNRPDVEVTQVTSKKFAQARSISLFGYKEMLDLQGFQALRVLDLGKNVLFKQVKNIGKCYQLKYLDLS

DTDIVELPEEIGNVQSLETLDLRNCRRLTLPSTISGLRKLVRLLVDYTAALPEEISGLVALQVLSCASYNSVKFM

QALGQLTELRSLAFKCWNPDWYFDAGMYKEVSVASLRELGKHKLQYLDICDDDAIPDALMCSSSESDCPFPHLQK

LVLSNHNIQRIPRWIGSLVNLCHLEIVVKTTRQNDLGTLGNLPCLLYLKICRLYEPVESQQLIVPNRGFRCLKEL

CFQCWCPLGLEFAPGAMPWVQTFRLWFMPCWKSCDHGVSVGLGIEHLLELKLVDVKTGYGCGKREVKSFEAAITA

VVANHPRRPALVLRRSGERSAVRKENWTAVETNMNKSLFDSSTVRQRLQKQSRFQT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	150	457	1.8e-61
NB-ARC [Pfam ls]	150	457	9.7e-62
LRR [Pfam ls]	593	615	0.16
LRR [Pfam ls]	616	638	0.65
LRR [Pfam ls]	747	769	6.7

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	593	615	0.005
LRR [sensitive, ls]	593	615	0.16
LRR [sensitive, ls]	616	638	0.021
LRR [sensitive, ls]	616	638	0.65
LRR [sensitive, ls]	747	769	0.21
LRR [sensitive, ls]	747	769	6.7

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	5	914	1e-137
I2 [L. esculentum]	27	800	3e-45
Pib [Oryza sativa].	43	313	2e-14
Pi-ta [Oryza sativa]	57	687	1e-88
RPM1 [A. thaliana]	68	804	3e-64
RPS2 [A. thaliana]	110	813	3e-30
L6 [L. usitatissimum]	158	500	5e-12
Pib [Oryza sativa].	160	640	6e-55
M [L. usitatissimum]	161	431	6e-13
Xa1 [Oryza sativa]	186	687	1e-26
Pi-ta [Oryza sativa]	632	913	2e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	50	73

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6737.m00174

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)