Report for 6753.m00154

 > 6753.m00154, length: 924, copies: 2 

MAGALVSASTGVMESLLGKLSSMLEKEYAKKKAVEKDVLFLRNELSSMNTVMQKYAMLSEPDLQVKAWMKEVREL

AYDIEDTIDAFMARSEKSNEPTGIRGFIINNILKLRELLSSCTISQEIEKLKNQVLEVNDRRKRYKLDVSVSMGT

GCESIDPRLPAFYSEVGGLVGIDGPRDKIIKLLRENAADEDCGFVNRLKMVSIAGFGGLGKTTLAKQVYEKIKWQ

FDCAAFVFVSQIPDMKRVLLDLLCGLGASGNTWDDEKQLIDKIREFLHDKRYIIVIDDIWSISSWEILKCVLPEN

NSGSRIITTTRILDVSMICCSTFNGSIYRIKPLSDDDSRRLFCRRIFHGEHSCPSHLEELSKAILRKCGGLPLAI

LHIASLLATKSNTKEEWELVLNSIGSALENSHTLQGLKKILLLSFYDLPPQLKTCLLYLSIYPEDCMINSKELIR

KWIAEGFIAEDSGKRLDQVAESYLNDLINRSMILPFDITHADGVQYYQVHDVVLNIIISMSKEENFVTIIDGHKC

SSLQEKIRRVSLQFNDSEDVVVPTNITNRSCVRSLSIFGITKQVPYFMDLQSLRVLDLGYCTLLQNQHIECLGSM

LQLRYLVLHSQLITELPDEIGNLQHLEMLDVTLCSIQALPDTIVRLQKLVCLYVSTKVKLPEMIGTMQCLEELFH

ISSNSIRLAGDLKCLKKLRDLAIAVEDPVGTKSSTLRYREVVRSSLTELGRHNLQSLSLNYKGDENFILDSSMGS

CFSTQRLRKLIIGKTLSRVPEWMSIFDNLTHLQLCISRMEQSDINILKGIDSLIFLRLVFTGHAPDGRIVIDNRG

FQALKELYLLCFIPGMWPVFEPGAMQELQKYHLTFKLQKVHCKNSVLDFGLQHLSSLQHISAIIIPSGATSEDTL

VAEDAIRSATSIHPNQPIAEIFVE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	154	463	1.3e-68
NB-ARC [Pfam ls]	154	463	3.5e-69
LRR [Pfam ls]	602	624	0.78

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	577	601	1.4
LRR [sensitive, ls]	577	601	15
LRR [sensitive, ls]	602	624	0.071
LRR [sensitive, ls]	602	624	0.78
LRR [sensitive, ls]	625	647	2.2
LRR [sensitive, ls]	625	647	24

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	700	5e-42
RPM1 [A. thaliana]	1	888	3e-68
Pi-ta [Oryza sativa]	1	652	2e-88
Mla1 [Hordeum vulgare].	10	917	1e-137
Pib [Oryza sativa].	65	342	1e-14
RPS2 [A. thaliana]	119	652	3e-28
M [L. usitatissimum]	122	437	2e-12
N [N. glutinosa]	164	513	5e-14
Pib [Oryza sativa].	164	888	1e-62
L6 [L. usitatissimum]	165	437	8e-13
Xa1 [Oryza sativa]	196	737	7e-36
Pi-ta [Oryza sativa]	711	914	1e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	120	142

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6753.m00154

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)