Report for 6755.m00121

 > 6755.m00121, length: 960, copies: 1 

MVGATVSASAGVMNSLLGKLSTLLDKEYTKHKNVEKDVMFLQRELPSMEAVLQKHAMQDELDVQLKAWVSELREL

AYDIEDSIDAFMVRIEHYSDESAGIKGFMNELVGIKGPRDCIIKLLTYEADSGPSRQQLKVVSIVGCGGLGKTTL

ANQVYKEINGQFDCKAFVSMSQKPDMRKILMDLLSQILGNGSPMCFDEQRLIDKLREFLKDKRYLIVIDDIWSTS

AWEIVKSAFPDNNLRSRIITTTRIMDVAKSCSANLQEYVYTIKPLNHQDSSKLFVKKIFPSGCGVPQHLKEVSNA

ILKKCGGLPLAILIIAGLLASKYDRKDEWEAVHNSIGSELGKNHTLEGFRRILMLSFYDLPHDLKTCFLYLSIFP

EDDLIVRKQLVWKWVAEGFIRKVRGKRPDQVAESYFYDLINRNMIQAVGVQYKGNIYGCRVHDLVLDLIRSLSAQ

INFVIAIDDKGYESSPRKIRRLSLQASNLEDQEMQKLVSNQSHIRSLIMFRAFKKAPDLFKFHALRILDLSECNC

LEDHHITCIVNMFQLRYLSLPCRITELPEQTGNLQHLEVLNIRRCMIKTLPEPIVKLGKLMCLHVKSGVKLPDEI

GRMQALQELESISIPCNSVRLIEEIGRLTRLRRLTVETTSTTEKMGDQEVRFREMLVSSLTELGRNGLESLCISY

PHGQNFILDSLFGSGCSLPKFHELDIKNYLCWVPRWITMLSSLVHLCLSMYDIDEEDMRVLNGISTLLFLHLELR

NPPEERLVIGCDGLRHLNELHVFCQHSTMPLTFAPGAMPELHRLRLEFGARETLRMYGDFDFGIEHLSGLRDIRV

DINYYSGGTDMDAEAVAAKDAITTASIIHPNRPLHDVRMHVTMMFTLKEAAQSKTLIIQKFCENYSSYYHLSLRH

GTSSLGLEETTYVSSGNLAIKIRCEYGKLIEIRIKIQEIRNVNVRKCDILVQLGYGMCDP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	91	400	9.7e-69
NB-ARC [Pfam fs]	127	400	1.2e-70
LRR [Pfam ls]	561	583	2.5

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	514	538	5.9
LRR [sensitive, ls]	514	538	64
LRR [sensitive, ls]	561	583	0.23
LRR [sensitive, ls]	561	583	2.5
LRR [sensitive, ls]	608	629	2.7
LRR [sensitive, ls]	608	629	30

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	3	723	7e-44
Mla1 [Hordeum vulgare].	11	104	2e-12
N [N. glutinosa]	37	374	1e-10
Mla1 [Hordeum vulgare].	40	864	1e-119
M [L. usitatissimum]	53	374	2e-14
L6 [L. usitatissimum]	65	374	3e-13
RPS2 [A. thaliana]	104	680	3e-32
RPM1 [A. thaliana]	105	825	4e-64
Pi-ta [Oryza sativa]	119	565	9e-85
Pib [Oryza sativa].	132	628	1e-69
Xa1 [Oryza sativa]	134	656	2e-33
Pi-ta [Oryza sativa]	708	855	4e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6755.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)