Report for 6760.m00146

 > 6760.m00146, length: 1199, copies: 1 

MAASPPFMAAAAFLTLVVVLFRAPAPAIAVGEEAAALLAFRRASVADDPDGALASWVLGAGGANSTAPCSWDGVS

CAPPPDGRVAAVDLSGMSLAGELRLDALLALPALQRLNLRGNAFYGNLSHAAPSPPCALVGEDISSNALNGTLPP

SFLAPCGVLRSGEPVEERPRPAAGSPFAPSLRSLDLSRNRLADAGLFTTSSPGARGRLAACSAVTTLDVSWNHMS

GGLPPGLVATAPANLTYLNIAGNNFTGDVSGYDFGGCANLTVLDWSYNGLSSTRLPPGLINCRRLETLEMSGNKL

LSGALPTFLVGFSSLRRLALAGNEFTGAIPVELGQLCGRIVELDLSSNRLVGALPASFAKCKSLEVLDLGGNQLA

GDFVASVVSTIASLRELRLSFNNITGVNPLPVLAAGCPLLEVIDLGSNELDGEIMPDLCSSLPSLRKLLLPNNYL

NGTVPPSLGDCANLESIDLSFNLLVGKIPTEIIRLPKIVDLVMWANGLSGEIPDVLCSNGTTLETLVISYNNFTG

SIPRSITKCVNLIWVSLSGNRLTGSVPGGFGKLQKLAILQLNKNLLSGHVPAELGSCNNLIWLDLNSNSFTGTIP

PQLAGQAGLVPGGIVSGKQFAFLRNEAGNICPGAGVLFEFFGIRPERLAEFPAVHLCPSTRIYTGTTVYTFTNNG

SMIFLDLSYNGLTGTIPGSLGNMMYLQVLNLGHNELNGTIPDAFQNLKSIGALDLSNNQLSGGIPPGLGGLNFLA

DFDVSNNNLTGPIPSSGQLTTFPPSRYDNNNGLCGIPLPPCGHNPPWGGRPRGSPDGKRKVIGASILVGVALSVL

ILLLLLVTLCKLRMNQKTEEVRTGYVESLPTSGTSSWKLSGVREPLSINVATFEKPLRKLTFAHLLEATNGFSAE

TLIGSGGFGEVYKAKLKDGSVVAIKKLIHFTGQGDREFTAEMETIGKIKHRNLVPLLGYCKIGDERLLVYEYMKH

GSLDVVLHDKAKASVKLDWSARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDNNLDARVSDFGMARLMNA

LDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLSGKKPIDPTEFGDNNLVGWVKQMVKENRSSE

IFDPTLTDRKSGEAELYQYLKIACECLDDRPNRRPTMIQVMAMFKELQLDSDSDILDGFSINSSTIDESGEKSM

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	180	201	4.5
LRR [Pfam ls]	239	263	0.13
LRR [Pfam ls]	314	337	3.8
LRR [Pfam ls]	339	362	0.17
LRR [Pfam ls]	388	409	0.015
LRR [Pfam ls]	414	438	0.46
LRR [Pfam ls]	439	462	4.8
LRR [Pfam ls]	463	487	0.17
LRR [Pfam ls]	512	535	1.4
LRR [Pfam ls]	536	559	0.075
LRR [Pfam ls]	584	604	0.61
LRR [Pfam ls]	676	699	0.47
LRR [Pfam ls]	700	723	0.0022
LRR [Pfam ls]	724	747	0.02
Ser/Thr pkinase [Pfam fs]	897	1167	1.4e-52
Ser/Thr pkinase [Pfam ls]	897	1169	1.2e-52

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	83	107	2.6
LRR [sensitive, ls]	83	107	67
LRR [sensitive, ls]	108	131	1.6
LRR [sensitive, ls]	108	131	42
LRR [sensitive, ls]	180	201	0.18
LRR [sensitive, ls]	180	201	4.5
LRR [sensitive, ls]	213	237	0.26
LRR [sensitive, ls]	213	237	6.6
LRR [sensitive, ls]	239	263	0.0049
LRR [sensitive, ls]	239	263	0.13
LRR [sensitive, ls]	264	288	0.65
LRR [sensitive, ls]	264	288	17
LRR [sensitive, ls]	289	313	0.23
LRR [sensitive, ls]	289	313	5.8
LRR [sensitive, ls]	314	337	0.15
LRR [sensitive, ls]	314	337	3.8
LRR [sensitive, ls]	339	362	0.0066
LRR [sensitive, ls]	339	362	0.17
LRR [sensitive, ls]	363	387	0.23
LRR [sensitive, ls]	363	387	5.8
LRR [sensitive, ls]	388	409	0.00058
LRR [sensitive, ls]	388	409	0.015
LRR [sensitive, ls]	414	438	0.018
LRR [sensitive, ls]	414	438	0.46
LRR [sensitive, ls]	439	462	0.19
LRR [sensitive, ls]	439	462	4.8
LRR [sensitive, ls]	463	487	0.0067
LRR [sensitive, ls]	463	487	0.17
LRR [sensitive, ls]	512	535	0.056
LRR [sensitive, ls]	512	535	1.4
LRR [sensitive, ls]	536	559	0.0029
LRR [sensitive, ls]	536	559	0.075
LRR [sensitive, ls]	560	583	0.27
LRR [sensitive, ls]	560	583	6.9
LRR [sensitive, ls]	584	604	0.024
LRR [sensitive, ls]	584	604	0.61
LRR [sensitive, ls]	676	699	0.018
LRR [sensitive, ls]	676	699	0.47
LRR [sensitive, ls]	700	723	8.7e-05
LRR [sensitive, ls]	700	723	0.0022
LRR [sensitive, ls]	724	747	0.00078
LRR [sensitive, ls]	724	747	0.02
LRR [sensitive, ls]	748	770	0.42
LRR [sensitive, ls]	748	770	11

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	14	1178	1e-115
Xa21 [O. sativa]	29	603	3e-43
CLV2 [A. thaliana]	32	728	9e-40
Cf-9 [L. pimpinellifolium]	65	792	2e-58
CLV2 [A. thaliana]	214	773	2e-41
CLV2 [A. thaliana]	230	740	4e-36
Xa21 [O. sativa]	280	983	1e-73
CLV2 [A. thaliana]	338	761	1e-34
CLV2 [A. thaliana]	487	771	9e-18
Xa21 [O. sativa]	521	764	1e-18
Xa21 [O. sativa]	677	770	9e-12
Rpg1 [Hordeum vulgare]	880	1182	1e-32
Rpg1 [Hordeum vulgare]	883	1166	9e-39
Pto [L. esculentum]	890	1166	2e-43

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	811	833	out -> in

Report for 6760.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)