Report for 6762.m00126

 > 6762.m00126, length: 995, copies: 1 

MANKMKKMRDQLRKIKEGHEAFRLTPDSTPYNEHHRPDPRETTSKVIQSSIIGRDKERKQVVSLLSASDEEDTVI

LPIYGFGGIGKTALAQLVFNDTQFRGYDHRVWVYVSQVFDLKKIGNTIISQVSNEGNKNEYTRENINGRLCDLLE

DKNTLIVLDDLWETNDFHLNELNLMLNTKGKIKVLVTTRNEDVAKKICTHKPYRLNPLDSTMCWNIIKQRSNLEA

RGDKDQIEQVGWVIAKKCGGIALAAHALGFLLSGMDLVEWRALSNSDIWTEAFSDNSVLPSLKLTYKNMPPYLRL

CFAYCAIFPKGHNIAKASLVHQWIALGFIEPSKTFSSVRLGEKYIRQLVGMSFLQRSILHTEQEVFTMHDMVHDV

ARSVMDEELVFFNDTKISSTTEQKFCHYALLENYSKSSNLSTILPATLRAVHTSNCSKLVLQGDEFSFTKFLRVL

DLTDCSIRILPSSIGKLKQLRFLIAPNIGDNVFPKSITLLPKLKYLDLHGSFRISALQGSISKHACLIHLDLSGC

SNIRVIQPEALCGLTKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYLNLSGCQG

LVKLPMSFRNLKNLVHLDLSGCSRVQDFKQVFGGLTKLQYLNLSKIFGRTRVGDNWDGYPETISTLNDLEYLNLS

RNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELIDSLEFLIVVGCSDQLKEYLRKSQFKNIPISLPHFIV

HSISGDSRSNLHMLEDINPVRLEISCLENVKSIEEARGIELSEKQNLSTLTFHWTSRADRLLEDKDVLGELMPPR

GLWNLSIQGYDSTTFPTWFVGISHHLPSLVKIELKDLHRCRHLPPLGQLPNLNEVHLQQMDSLTKIDGGFCGGDK

GAFRKLKVFTLRDMKQLEEWSTTTHSKGGEDSIEFMFPMLVTLSIELCPMLRLKLCPPMFHSWLISESDKAVDTG

LTEALMKIFAEDFMPTDSSE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	35	334	2.8e-50
NB-ARC [Pfam ls]	35	334	5.1e-50
LRR [Pfam ls]	446	468	0.18
LRR [Pfam ls]	516	540	0.0027
LRR [Pfam ls]	541	564	0.82
LRR [Pfam ls]	565	588	0.036
LRR [Pfam ls]	589	612	0.042
LRR [Pfam ls]	613	636	0.051
LRR [Pfam ls]	668	691	0.11
LRR [Pfam ls]	692	715	3.3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	446	468	0.0068
LRR [sensitive, ls]	446	468	0.18
LRR [sensitive, ls]	492	515	0.61
LRR [sensitive, ls]	492	515	16
LRR [sensitive, ls]	516	540	0.0001
LRR [sensitive, ls]	516	540	0.0027
LRR [sensitive, ls]	541	564	0.031
LRR [sensitive, ls]	541	564	0.82
LRR [sensitive, ls]	565	588	0.0013
LRR [sensitive, ls]	565	588	0.036
LRR [sensitive, ls]	589	612	0.0016
LRR [sensitive, ls]	589	612	0.042
LRR [sensitive, ls]	613	636	0.0019
LRR [sensitive, ls]	613	636	0.051
LRR [sensitive, ls]	668	691	0.0042
LRR [sensitive, ls]	668	691	0.11
LRR [sensitive, ls]	692	715	0.12
LRR [sensitive, ls]	692	715	3.3
LRR [sensitive, ls]	853	875	1.9
LRR [sensitive, ls]	853	875	51
LRR [sensitive, ls]	876	900	3.2
LRR [sensitive, ls]	876	900	85

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	643	3e-25
Xa1 [Oryza sativa]	1	893	1e-50
I2 [L. esculentum]	3	593	2e-54
Mla1 [Hordeum vulgare].	5	618	5e-36
RPP5 [A. thaliana]	32	800	2e-13
RPS2 [A. thaliana]	42	707	5e-41
RPM1 [A. thaliana]	48	748	6e-34
Pib [Oryza sativa].	48	703	2e-34
N [N. glutinosa]	50	745	1e-28
FLS2 [A.thaliana]	446	791	5e-14
Xa21 [O. sativa]	447	711	4e-11
RPP5 [A. thaliana]	450	730	1e-11
RPP5 [A. thaliana]	517	726	8e-16
I2 [L. esculentum]	661	962	1e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6762.m00126

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)