Report for 6782.m00121

 > 6782.m00121, length: 659, copies: 1 

MHGNYDGKGNDLVSSPLVFDVHMGLHFWDRISVSNSAKTYIAEVIVVAEVNSISVCLMDIGSGIPFISSLEMRQM

KSSLYPAAKANQSIALQERHSMGTSSLLSVSAHVHHHVSTVSPKLLLPPFQRYPDDPYDRLWWPWQGSSRLLNIS

TNQTIKRYWNDKFEVSARILQAAVTSPATSIPLNFSWTIPTSWPTIEAVPAYYVDVHYTEFQKPQGREFNTYYNG

ALWPANENPITPPYLLADYTFSTSQYTSDNGFYNICLVATNTSILPPSLTAFEIYYLVQHNGTMTSLEDVDAMMT

LKTEYQVKMNWMGDPCLPENYTWTGLKCQSDGVTSGVTSLDLSNSDLKGAISDKFSLLKSLQYFVSCVEFNVTGL

EDVYSNHGASLIFMSFYPFQLQLTTIFSLFQPPHIKKTMKITYTYLMAVESLTTVHHRYLVFLVGYCSNKNHLAL

IYEYMPNGSLYDHIRGKNAIVQTLGWHDRARIALEAAQGLDYLHTGCMLPIIHRDLKSQNILLGHDMVAKISDFG

LSRYCLSGRLTISSDVFSFGVVLLEIVTGEPPIISTTVHIVQRVKEKVSMGNIEAIVDPRFGGEYDTNSVWKVVD

IALLCTKEASHERPTMSTVVAELKVALALEKARASGSISDISQGGANFELSINSLLSAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	394	625	8.8e-13
Ser/Thr pkinase [Pfam fs]	421	528	8.9e-26
Ser/Thr pkinase [Pfam fs]	536	557	0.0017

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	424	623	6e-16
FLS2 [A.thaliana]	425	623	1e-18
Rpg1 [Hordeum vulgare]	426	623	3e-14
Pto [L. esculentum]	432	632	3e-34

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6782.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)