Report for 902.m00124

 > 902.m00124, length: 959, copies: 1 

MAEGAFLSSLVDRLSTTALSGITSLWGVKEQVDSLIHELQAVECFLKDADLREIRRQATSNNNWFWLHSLRDAAY

DAEDLIESVELHEGRYHTLNPLLQPLNSYRFAKQINEIKSRFQSIIDGWAKNASMLRELRDMSSSSSSVTSAADS

LWRRSSCHLGDDVVVGREEEAGMIIDRLLRCTAHREVVGIVGMGGVGKTTLASLVYNKVSAIQTGGTSLRPDSPK

GTSSRSSVEMYFDACAWVPVGQNADALGLLKITSAQIGVELNSTQVAAAKNAMFRFLQHKKYLIVLDDIWTTETW

LELSEAFPKSTNGSKILLTTRSKEIAVSADPSSLPYELDPLSEELSFQLFITKVFGLNHVDTTSCPPQLKDVGHQ

LSKKCGGLPLALVVLGGLLSGKEKQFEVWRNILKSMKWSNYEAGNQCLEILALSYSCLPYHMKLCFMYLGAFKEE

TEISVSKLIKLWIGDDFIPQQDGKTREETANDYLRELIQRCLVQPLLPAHKQGFKRVRIHGLLCELARSEARESR

FFYCENGDAVSRAEGKYYRRLALHTKLIAFHELSNSEKLRSLLIFPGVIESCVITVGHQALRPFSRAFCHAFFLF

PLWGFQHNILEQLTSMQYIRVLELEGHERLACDLKSVQSNLNHLRYMSLRNTNLGEFPFPESNFPLLQTLDIRGT

FIRKLPGILESLDTLRHIYLNWRVSLDIRRLTNLQTLHGVIILPNSQAERNLMALTNLRKLRFRTWRGVEYRPES

PNGFDIDRYNAQSSMGNENHALAESLRQLGNLHSIFIMMPFASFQPITSDIVQAVTSHEQLHKLKLQGRVHRNLL

LEDPHFSCIKSITLSGSWIVLSPMESLGSLTTLYELKLKDDALRCSEVSCLQNSFPELRYLKISGLKKLRVFHVG

NGSFPNLTRFSIHDCTEFLSTVEVMEHATRLQVLKIKEMPSVLPDVTDFCHSRNINLIS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	150	213	1.7e-14
NB-ARC [Pfam ls]	150	473	8.7e-72
NB-ARC [Pfam fs]	231	473	1.7e-57

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	643	665	0.82
LRR [sensitive, ls]	643	665	26
LRR [sensitive, ls]	666	688	0.32
LRR [sensitive, ls]	666	688	10
LRR [sensitive, ls]	833	856	1.8
LRR [sensitive, ls]	833	856	56
LRR [sensitive, ls]	882	908	0.64
LRR [sensitive, ls]	882	908	20

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	4	949	4e-52
Mla1 [Hordeum vulgare].	7	737	1e-50
RPM1 [A. thaliana]	25	787	9e-53
M [L. usitatissimum]	65	494	7e-14
Pi-ta [Oryza sativa]	66	645	9e-37
N [N. glutinosa]	106	467	8e-14
Xa1 [Oryza sativa]	112	915	1e-31
RPS2 [A. thaliana]	126	712	1e-23
Pib [Oryza sativa].	136	694	4e-40
L6 [L. usitatissimum]	159	494	1e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 902.m00124

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)